BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022G02SP1|AL427943
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1300 1577 0.0
>3x_Contig1300
Length = 6589
Score = 1577 bits (785), Expect = 0.0
Identities = 872/904 (96%), Gaps = 8/904 (0%)
Strand = Plus / Minus
Query: 1 ataggtagcataccagcatkcatcgttagaggtagatgattcagtatagaagtagaggat 60
||||||||||||||||| | |||||| ||||||||||||||||| | ||||||||||||
Sbjct: 5503 ataggtagcataccagc-tgcatcgtcagaggtagatgattcagaa--gaagtagaggat 5447
Query: 61 gawgaggaggaagatkaagatgaagaggaggtttcatcgtcatcgtcggaagaagarctg 120
|| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5446 gaagaggaggaagatgaagatgaagaggaggtttcatcgtcatcgtcggaagaagagctg 5387
Query: 121 atagcaacgacgttagtcttggtgtaagtkgcaccgttatcagagttggtaatggtgatt 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5386 atagcaacgacgttagtcttggtgtaagtggcaccgttatcagagttggtaatggtgatt 5327
Query: 181 ttcgatgtagtggaactaccaatagtggtttgtggtgctatggtgagggtcttgacgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5326 ttcgatgtagtggaactaccaatagtggtttgtggtgctatggtgagggtcttgacgtat 5267
Query: 241 gaggcaccattgttggtgatggtagtggtcacggtggtagattcagtgtacactggagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5266 gaggcaccattgttggtgatggtagtggtcacggtggtagattcagtgtacactggagca 5207
Query: 301 gcagagtcagtgacgactttkgtgtacacgtgatcaccgttagtg-gcaacaatagtttt 359
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 5206 gcagagtcagtgacgactttggtgtacacgtgatcaccgttagtgtgcaacaatagtttt 5147
Query: 360 watggtggaaacggtagttgctgcttcagcacaaaanacg-gaaacagtagcagcaaaga 418
|||||||||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 5146 aatggtggaaacggtagttgctgcttcagcagcaacaacgtgaaacagtagcagcaaaga 5087
Query: 419 aagcggtgttggagaacttcattgtttgagtgagtttggtatttkacgtcgtactaacta 478
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5086 aagcggtgttggagaacttcattgtttgagtgagtttggtatttgacgtcgtactaacta 5027
Query: 479 ccaaaccaagtaagaagaaaaawaacggaaagawagaacagaatacagaaacaccgtatc 538
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 5026 ccaaaccaagtaagaagaaaaaaaacggaaagaaagaacagaatacagaaacaccgtatc 4967
Query: 539 gaagctcgagataacaacccaattcccgagtgtaacgcntgattacatgccttttatata 598
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4966 gaagctcgagataacaacccaattcccgagtgtaacgcttgattacatgccttttatata 4907
Query: 599 tktkcgacgactttcgaacactctcactaggaccaagagtataatssgaaagaagtagca 658
| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4906 ttttcgacgactttcgaacactctcactaggaccaagagtataatccgaaagaagtagca 4847
Query: 659 cttccctttggttatggtttccgtcgtagcatccacacaaagaaaggaggtaagak-ata 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 4846 cttccctttggttatggtttccgtcgtagcatccacacaaagaaaggaggtaagagaata 4787
Query: 718 gtgcccagggtgcactcgaatctctacccagagacctgcgcatatgtaccatgtatggtc 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4786 gtgcccagggtgcactcgaatctctacccagagacctgcgcatatgtaccatgtatggtc 4727
Query: 778 atttattcacatcttgtttgtagtatgtctcgacagttttgccagadttacaatgggtaa 837
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4726 atttattcacatcttgtttgtagtatgtctcgacagttttgccagaattacaatgggtaa 4667
Query: 838 aragagagatsaggacatagtcactgtgtggctaagtcaatcgtatggc-aaacgaataa 896
| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4666 a-agagagatcaggacatagtcactgtgtggctaagtcaatcgtatggcaaaacgaataa 4608
Query: 897 caat 900
||||
Sbjct: 4607 caat 4604
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4339
Number of Sequences: 1807
Number of extensions: 4339
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)